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rpmE 50S ribosomal protein L31 [ Bacillus velezensis FZB42 ]

Gene ID: 93082567, updated on 3-Dec-2024

Summary

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Gene symbol
rpmE
Gene description
50S ribosomal protein L31
Locus tag
RBAM_RS17305
Gene type
protein coding
Organism
Bacillus velezensis FZB42 (strain: FZB42, culture-collection: BGSC:10A6, culture-collection: DSM:23117, type-material: type strain of Bacillus amyloliquefaciens subsp. plantarum)
Lineage
Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus amyloliquefaciens group
Old locus tag
RBAM_034230
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Genomic context

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Sequence:
NC_009725.2 (3531391..3531591, complement)

NC_009725.2Genomic Context describing neighboring genes Neighboring gene oxaloacetate-decarboxylating malate dehydrogenase Neighboring gene thymidine kinase Neighboring gene transcription termination factor Rho Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009725.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Liberation of zinc-containing L31 (RpmE) from ribosomes by its paralogous gene product, YtiA, in Bacillus subtilis. Akanuma G, et al. J Bacteriol, 2006 Apr. PMID 16547061, Free PMC Article
  2. Comparative analysis of the complete genome sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42. Chen XH, et al. Nat Biotechnol, 2007 Sep. PMID 17704766
  3. Two C or not two C: recurrent disruption of Zn-ribbons, gene duplication, lineage-specific gene loss, and horizontal gene transfer in evolution of bacterial ribosomal proteins. Makarova KS, et al. Genome Biol, 2001. PMID 11574053, Free PMC Article
  4. Zinc is a key factor in controlling alternation of two types of L31 protein in the Bacillus subtilis ribosome. Nanamiya H, et al. Mol Microbiol, 2004 Apr. PMID 15049826

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
50S ribosomal protein L31

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009725.2 Reference assembly

    Range
    3531391..3531591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003151132.1 MULTISPECIES: 50S ribosomal protein L31 [Bacteria]

    See identical proteins and their annotated locations for WP_003151132.1

    UniProtKB/Swiss-Prot
    A7Z9S6, Q03223
    UniProtKB/TrEMBL
    A0A063XD11, A0A0M0KS96, A0A150F4C1, A0A199WDR2, A0A1D9PPD2, A0A1R1QWL5, A0A1R1S153, A0A2M8T147, A0A6H0WME6, A0A6M3ZH72, A0A7G7UEI7, A0A8E0VRN5, A0A9P1JKI3, A0A9P2XQZ8, A0A9Q4E337, A0A9Q4EV71, A0A9Q5JQN9, A0A9Q6F3P1, A0A9W5LLR7, A0AA96UNZ7, A0AAE2NVQ0, A0AAI8HKH2, A0AAP3CTB9, A0AAP3FSG5, A0AAP5QMY1, A0AAU8QCB7, A0AAX1EVK9, E0TUS5, G4P1X3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A7Z9S6.1