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NQ546_RS08335 sigma-54 interaction domain-containing protein [ Bacteroides eggerthii ]

Gene ID: 93070459, updated on 9-Jan-2025

Summary

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Gene symbol
NQ546_RS08335
Gene description
sigma-54 interaction domain-containing protein
Locus tag
NQ546_RS08335
Gene type
protein coding
Organism
Bacteroides eggerthii (strain: DSM 20697, nat-host: Homo sapiens, culture-collection: DSM:20697, type-material: type strain of Bacteroides eggerthii)
Lineage
Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
Old locus tag
NQ546_08335
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Genomic context

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NZ_CP102258.1Genomic Context describing neighboring genes Neighboring gene DUF4837 family protein Neighboring gene 4-hydroxythreonine-4-phosphate dehydrogenase PdxA Neighboring gene LptE family protein Neighboring gene hypothetical protein Neighboring gene preprotein translocase subunit SecG

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP102258.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sigma 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domains. Morett E, et al. J Bacteriol, 1993 Oct. PMID 8407777, Free PMC Article
  2. Domain architectures of sigma54-dependent transcriptional activators. Studholme DJ, et al. J Bacteriol, 2003 Mar. PMID 12618438, Free PMC Article
  3. Mobile Type VI secretion system loci of the gut Bacteroidales display extensive intra-ecosystem transfer, multi-species spread and geographical clustering. García-Bayona L, et al. PLoS Genet, 2021 Apr. PMID 33901198, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
sigma-54 interaction domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP102258.1 Reference assembly

    Range
    2051297..2052550
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004289668.1 MULTISPECIES: sigma-54 interaction domain-containing protein [Bacteroides]

    See identical proteins and their annotated locations for WP_004289668.1

    UniProtKB/TrEMBL
    A0A380YJ14, E5WZL3
Nucleotide Protein
Heading Accession and Version