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LOC9305465 uncharacterized LOC9305465 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9305465, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9305465
Gene description
uncharacterized LOC9305465
Locus tag
ARALYDRAFT_913468
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9305465 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302549.1 (4943007..4950486, complement)

NW_003302549.1Genomic Context describing neighboring genes Neighboring gene peroxidase 45 Neighboring gene villin-4 Neighboring gene GDSL esterase/lipase At4g30140 Neighboring gene uncharacterized LOC110226803

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302549 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC9305465

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302549.1 Reference v.1.0 Primary Assembly

    Range
    4943007..4950486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002869348.2 → XP_002869394.1  uncharacterized protein LOC9305465

    See identical proteins and their annotated locations for XP_002869394.1

    UniProtKB/TrEMBL
    D7MC82
    Conserved Domains (1) summary
    pfam10441
    Location:1726 → 1963
    Urb2; Urb2/Npa2 family
Nucleotide Protein
Heading Accession and Version

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