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LOC9305464 villin-4 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9305464, updated on 21-Dec-2023

Summary

Gene symbol
LOC9305464
Gene description
villin-4
Locus tag
ARALYDRAFT_491737
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

See LOC9305464 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302549.1 (4933219..4940199, complement)

NW_003302549.1Genomic Context describing neighboring genes Neighboring gene transcription factor bHLH146 Neighboring gene peroxidase 45 Neighboring gene uncharacterized LOC9305465 Neighboring gene GDSL esterase/lipase At4g30140

Genomic regions, transcripts, and products

Genomic Sequence:
NW_003302549 Unplaced Scaffold Reference v.1.0 Primary Assembly

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302549.1 Reference v.1.0 Primary Assembly

    Range
    4933219..4940199 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021018221.1XP_020873880.1  villin-4

    UniProtKB/TrEMBL
    D7MC81
    Conserved Domains (8) summary
    cd11288
    Location:517608
    gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
    cd11289
    Location:139217
    gelsolin_S2_like; Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins
    cd11290
    Location:12124
    gelsolin_S1_like; Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins
    cd11291
    Location:621720
    gelsolin_S6_like; Gelsolin sub-domain 6-like domain found in gelsolin, severin, villin, and related proteins
    cd11292
    Location:253343
    gelsolin_S3_like; Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins
    cd11293
    Location:386486
    gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
    pfam02209
    Location:941975
    VHP; Villin headpiece domain
    cl25836
    Location:708868
    Retinal; Retinal protein