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LOC9304354 enoyl-CoA delta isomerase 2, peroxisomal [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9304354, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9304354
Gene description
enoyl-CoA delta isomerase 2, peroxisomal
Locus tag
ARALYDRAFT_915422
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9304354 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302549.1 (14033684..14034737)

NW_003302549.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At4g14450, chloroplastic Neighboring gene enoyl-CoA delta isomerase 3 Neighboring gene uncharacterized LOC110226494 Neighboring gene ankyrin repeat-containing protein ITN1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302549 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables delta(3)-delta(2)-enoyl-CoA isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables enoyl-CoA hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
enoyl-CoA delta isomerase 2, peroxisomal
Names
enoyl-CoA hydratase/isomerase family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302549.1 Reference v.1.0 Primary Assembly

    Range
    14033684..14034737
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002868236.2 → XP_002868282.1  enoyl-CoA delta isomerase 2, peroxisomal

    See identical proteins and their annotated locations for XP_002868282.1

    UniProtKB/TrEMBL
    D7MH17
    Conserved Domains (1) summary
    PLN02267
    Location:1 → 240
    PLN02267; enoyl-CoA hydratase/isomerase family protein
Nucleotide Protein
Heading Accession and Version

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