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LOC9303695 acid phosphatase 1 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9303695, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9303695
Gene description
acid phosphatase 1
Locus tag
ARALYDRAFT_329150
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9303695 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302549.1 (7273508..7274929)

NW_003302549.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9303693 Neighboring gene uncharacterized LOC9303694 Neighboring gene U-box domain-containing protein 35 Neighboring gene oleosin 18.5 kDa Neighboring gene peptide methionine sulfoxide reductase A4, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302549 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acid phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acid phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302549.1 Reference v.1.0 Primary Assembly

    Range
    7273508..7274929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002867577.2 → XP_002867623.1  acid phosphatase 1

    See identical proteins and their annotated locations for XP_002867623.1

    UniProtKB/TrEMBL
    D7MGJ1
    Conserved Domains (1) summary
    pfam03767
    Location:49 → 260
    Acid_phosphat_B; HAD superfamily, subfamily IIIB (Acid phosphatase)
Nucleotide Protein
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