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LOC9300697 D-inositol 3-phosphate glycosyltransferase [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9300697, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9300697
Gene description
D-inositol 3-phosphate glycosyltransferase
Locus tag
ARALYDRAFT_919149
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9300697 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302548.1 (19033108..19035508, complement)

NW_003302548.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9300695 Neighboring gene uncharacterized LOC9300696 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene uncharacterized LOC9302395

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302548 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC9300697
Names
glycosyl transferase family 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302548.1 Reference v.1.0 Primary Assembly

    Range
    19033108..19035508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002866274.2 → XP_002866320.1  uncharacterized protein LOC9300697

    See identical proteins and their annotated locations for XP_002866320.1

    UniProtKB/TrEMBL
    D7MRS7
    Conserved Domains (2) summary
    cd03801
    Location:87 → 493
    GT1_YqgM_like; This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to ...
    COG0438
    Location:87 → 493
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
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