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LOC9300443 CASP-like protein 2D1 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9300443, updated on 22-May-2022

Summary

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Gene symbol
LOC9300443
Gene description
CASP-like protein 2D1
Locus tag
ARALYDRAFT_495581
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AlCASPL2D1
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Genomic context

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See LOC9300443 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302548.1 (16849820..16850768)

NW_003302548.1Genomic Context describing neighboring genes Neighboring gene pyruvate decarboxylase 2 Neighboring gene uncharacterized LOC9302144 Neighboring gene uncharacterized ATP-dependent helicase IRC20 Neighboring gene FH protein interacting protein FIP2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302548 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
CASP-like protein 2D1
Names
integral membrane family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302548.1 Reference v.1.0 Primary Assembly

    Range
    16849820..16850768
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002864321.2 → XP_002864367.1  CASP-like protein 2D1

    See identical proteins and their annotated locations for XP_002864367.1

    UniProtKB/Swiss-Prot
    D7MUY4
    Conserved Domains (1) summary
    pfam04535
    Location:26 → 159
    DUF588; Domain of unknown function (DUF588)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
D7MUY4.1 GenPept UniProtKB/Swiss-Prot:D7MUY4

Gene LinkOut

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Research Materials