U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cadA lysine decarboxylase 2 [ Escherichia coli O157:H7 str. Sakai ]

Gene ID: 914175, updated on 4-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
cadA
Gene description
lysine decarboxylase 2
Locus tag
ECs_5113
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_002695.2 (5211047..5213194, complement)

NC_002695.2Genomic Context describing neighboring genes Neighboring gene lysine tRNA synthetase Neighboring gene dipeptide and tripeptide permease D Neighboring gene lysine/cadaverine transporter Neighboring gene cadBA operon transcriptional activator

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_002695.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. CadA negatively regulates Escherichia coli O157:H7 adherence and intestinal colonization. Vazquez-Juarez RC, et al. Infect Immun, 2008 Nov. PMID 18794292, Free PMC Article
  2. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
  3. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
  4. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
  5. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
lysine decarboxylase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002695.2 Reference assembly

    Range
    5211047..5213194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_313140.1 lysine decarboxylase 2 [Escherichia coli O157:H7 str. Sakai]

    See identical proteins and their annotated locations for NP_313140.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3P5DXD7, A0A478LL36
    Conserved Domains (1) summary
    PRK15400
    Location:1 → 714
    PRK15400; lysine decarboxylase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.