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vapC6 ribonuclease VapC6 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 888106, updated on 6-Oct-2023

Summary

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Gene symbol
vapC6
Gene description
ribonuclease VapC6
Locus tag
Rv0656c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (752984..753367, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene carotenoid cleavage oxygenase Neighboring gene ABC transporter ATP-binding protein Neighboring gene antitoxin VapB6 Neighboring gene integral membrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribonuclease VapC6
NP_215170.1
  • toxin, part of toxin-antitoxin (TA) operon with Rv0657c,contains PIN domain . This region is a possible MT-complex-specific genomic island (See Becq et al., 2007 PMID:17545187).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    752984..753367 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_215170.1 ribonuclease VapC6 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_215170.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R4M397
    Conserved Domains (1) summary
    cl28905
    Location:11 → 109
    PIN_SF; PIN (PilT N terminus) domain: Superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WFB5.1

Gene LinkOut

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Molecular Biology Databases