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vapC47 ribonuclease VapC47 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 887900, updated on 6-Aug-2024

Summary

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Gene symbol
vapC47
Gene description
ribonuclease VapC47
Locus tag
Rv3408
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (3826548..3826958)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene HTH-type transcriptional regulator Neighboring gene dioxygenase Neighboring gene antitoxin VapB47 Neighboring gene cholesterol oxidase Neighboring gene oxidoreductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribonuclease VapC47
NP_217925.1
  • toxin, part of toxin-antitoxin (TA) operon with Rv3407,contains PIN domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    3826548..3826958
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_217925.1 ribonuclease VapC47 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_217925.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0E8VFZ0
    Conserved Domains (1) summary
    cd09874
    Location:2 → 129
    PIN_MT3492-like; VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WF49.1

Gene LinkOut

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Molecular Biology Databases
Research Materials