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NAEGRDRAFT_64759 asparagine synthase [ Naegleria gruberi ]

Gene ID: 8861426, updated on 17-May-2024

Summary

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Gene symbol
NAEGRDRAFT_64759
Gene description
asparagine synthase
Locus tag
NAEGRDRAFT_64759
See related
AmoebaDB:NAEGRDRAFT_64759; VEuPathDB:NAEGRDRAFT_64759
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Naegleria gruberi (strain: NEG-M)
Lineage
Eukaryota; Discoba; Heterolobosea; Tetramitia; Eutetramitia; Vahlkampfiidae; Naegleria
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Genomic context

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See NAEGRDRAFT_64759 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
8

NW_003163316.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene enoyl-CoA hydratase family member Neighboring gene WD40 repeat domain-containing protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003163316.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of Naegleria gruberi illuminates early eukaryotic versatility. Fritz-Laylin LK, et al. Cell, 2010 Mar 5. PMID 20211133
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables asparagine synthase (glutamine-hydrolyzing) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in asparagine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
asparagine synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003163316.1 Reference assembly

    Range
    334327..341243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002679933.1 → XP_002679979.1  asparagine synthase [Naegleria gruberi]

    See identical proteins and their annotated locations for XP_002679979.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D2V7D7
    Conserved Domains (4) summary
    COG0810
    Location:699 → 843
    TonB; Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis]
    cd01991
    Location:318 → 588
    Asn_Synthase_B_C; The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the ...
    TIGR01536
    Location:96 → 586
    asn_synth_AEB; asparagine synthase (glutamine-hydrolyzing)
    cl00319
    Location:86 → 255
    Gn_AT_II; Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to ...
Nucleotide Protein
Heading Accession and Version

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