U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

QUE80_RS28435 RepB family plasmid replication initiator protein [ Phytobacter diazotrophicus ]

Gene ID: 86998616, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
QUE80_RS28435
Gene description
RepB family plasmid replication initiator protein
Locus tag
QUE80_RS28435
Gene type
protein coding
Organism
Phytobacter diazotrophicus (strain: TA9759)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Phytobacter
Old locus tag
PDTA9759_56180
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
plasmid: pTMTA97592

NZ_AP028049.1Genomic Context describing neighboring genes Neighboring gene tyrosine-type recombinase/integrase Neighboring gene pseudo Neighboring gene type II toxin-antitoxin system ParD family antitoxin

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_AP028049.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Structural analysis of a replication protein encoded by a plasmid isolated from a multiple sclerosis patient. Kilic T, et al. Acta Crystallogr D Struct Biol, 2019 May 1. PMID 31063152, Free PMC Article
  2. Structural basis for regulation of bifunctional roles in replication initiator protein. Nakamura A, et al. Proc Natl Acad Sci U S A, 2007 Nov 20. PMID 18000058, Free PMC Article
  3. Twenty years of the pPS10 replicon: insights on the molecular mechanism for the activation of DNA replication in iteron-containing bacterial plasmids. Giraldo R, et al. Plasmid, 2004 Sep. PMID 15336485
  4. Replication and control of circular bacterial plasmids. del Solar G, et al. Microbiol Mol Biol Rev, 1998 Jun. PMID 9618448, Free PMC Article
  5. Initiation of replication of plasmid pMV158: mechanisms of DNA strand-transfer reactions mediated by the initiator RepB protein. Moscoso M, et al. J Mol Biol, 1997 May 23. PMID 9180376

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
RepB family plasmid replication initiator protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_AP028049.1 Reference assembly

    Range
    1..1011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_000200070.1 MULTISPECIES: RepB family plasmid replication initiator protein [Gammaproteobacteria]

    See identical proteins and their annotated locations for WP_000200070.1

    UniProtKB/TrEMBL
    A0A1M2NJT1, A0A1Y6HTI6, A0A285B935, A0A2J0PIZ5, A0A2J5IXH5, A0A2T2XV06, A0A2X2PVY9, A0A348DM84, A0A4U9DH80, A0A5A9BXL9, A0A5P6H2A9, A0A7L7IZ01, A0A837F4L1, A0A873BMR9, A0A8B2S864, A0A8E6UGA9, A0A8H9QHD9, A0A8I0UVH7, A0A9Q6PDP8, A0AAE3RND5, A0AAE4EAU7, A0AAE7HAL7, A0AAJ2KSZ6, A0AAN5MSV4, A0AAP0VHC2, A0AAP0YTQ6, A0AAP2C657, F1C5W5