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F1644_RS08205 sigma-54-dependent transcriptional regulator [ Butyricimonas paravirosa ]

Gene ID: 86891275, updated on 9-Jan-2025

Summary

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Gene symbol
F1644_RS08205
Gene description
sigma-54-dependent transcriptional regulator
Locus tag
F1644_RS08205
Gene type
protein coding
Organism
Butyricimonas paravirosa (strain: DSM 105722, nat-host: Homo sapiens, culture-collection: DSM:105722, type-material: type strain of Butyricimonas paravirosa)
Lineage
Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Odoribacteraceae; Butyricimonas
Old locus tag
F1644_08240
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Genomic context

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NZ_CP043839.1Genomic Context describing neighboring genes Neighboring gene P-loop NTPase fold protein Neighboring gene ATP-binding protein Neighboring gene ATP-binding protein Neighboring gene tetracycline resistance ribosomal protection protein Tet(Q) Neighboring gene N-6 DNA methylase Neighboring gene DUF1896 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP043839.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Domain architectures of sigma54-dependent transcriptional activators. Studholme DJ, et al. J Bacteriol, 2003 Mar. PMID 12618438, Free PMC Article
  2. Diversity of structure and function of response regulator output domains. Galperin MY. Curr Opin Microbiol, 2010 Apr. PMID 20226724, Free PMC Article
  3. Signal sensing by sigma 54-dependent regulators: derepression as a control mechanism. Shingler V. Mol Microbiol, 1996 Feb. PMID 8830233
  4. Two-component signal transduction. Stock AM, et al. Annu Rev Biochem, 2000. PMID 10966457

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
sigma-54-dependent transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP043839.1 Reference assembly

    Range
    1942892..1944214 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004291471.1 MULTISPECIES: sigma-54-dependent transcriptional regulator [FCB group]

    See identical proteins and their annotated locations for WP_004291471.1

    UniProtKB/TrEMBL
    A0A015URP6, A0A016AT27, A0A078RVV6, A0A095Y9K9, A0A0B4N125, A0A0J6CGW6, A0A0J9FIJ0, A0A0P0GQ97, A0A134BEJ8, A0A137SZ58, A0A139LMV4, A0A143XYL1, A0A173S8E2, A0A174HAM4, A0A174QKV4, A0A174SA63, A0A174VFT1, A0A174VP73, A0A1C5VHG9, A0A1C7H036, A0A1F0IJB7, A0A1H5XQW2, A0A1M5GDP8, A0A1M6G067, A0A1M6XEU1, A0A1Y4GMS9, A0A1Y4JMC8, A0A1Y4Q4L6, A0A223HIJ0, A0A254RDU7, A0A285SCB8, A0A2D3NEC1, A0A2V1IJ31, A0A372YVV3, A0A374A243, A0A374UQT9, A0A374V9C5, A0A374WPB9, A0A379E0X5, A0A379MT03, A0A396M3G3, A0A3A5PAP4, A0A3A5QKG4, A0A3A5SA93, A0A3A5TCL3, A0A3A5YWX2, A0A3A5ZD98, A0A3A5ZJ80, A0A3D8HHM9, A0A3E4ZJ77, A0A3L7ZMF4, A0A3L8AA49, A0A3Q9INB8, A0A3R6NWX4, A0A3R6V7M1, A0A401LTW6, A0A412C6Y3, A0A412CRN8, A0A412TSJ0, A0A412VL44, A0A412X393, A0A414L174, A0A415TFV2, A0A416SV80, A0A449I6F3, A0A496C2N9, A0A496CXP4, A0A496DNM8, A0A4Q0TWH3, A0A4Q5GJT1, A0A4R4GGK7, A0A4V3R719, A0A5B3GFE1, A0A5B3GYQ5, A0A6N4H8G9, A0A7D6XTU1, A0A7G1HQA7, A0A7J0AUW1, A0A9Q5SPZ1, A0AA90ZWU4, A0AAN5AYL7, A0AAQ0QAW0, A0AAW3FIZ0, B0NP35, B3C7C4, B3JIW8, B5D3F0, B6VWH2, C3R2Y9, D0TQ40, D1JU82, D4VJ89, D7J973, E4MAW1, F3PMZ9, F7M264, G6ATZ0, I4Z7N5, I9ACA4, I9HWC1, I9QC04, I9U958, K0WVE6, K5Z7X0, K6A8M3, Q56VE6, Q650D7, R9H0J0, R9HP50, W0EWE5
Nucleotide Protein
Heading Accession and Version