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uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 855295, updated on 4-Jan-2025

Summary

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Official Full Name
uncharacterized protein
Primary source
SGD:S000004866
Locus tag
YMR253C
See related
AllianceGenome:SGD:S000004866; FungiDB:YMR253C; VEuPathDB:YMR253C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in cytoplasm. Orthologous to human SLC35G1 (solute carrier family 35 member G1). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (775946..777190, complement)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Hor7p Neighboring gene Mlo1p Neighboring gene uncharacterized protein Neighboring gene Gfd1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules. Tong AH, et al. Science, 2002 Jan 11. PMID 11743162
  2. Selective defects in gene expression control genome instability in yeast splicing mutants. Tam AS, et al. Mol Biol Cell, 2019 Jan 15. PMID 30462576, Free PMC Article
  3. Genetic interaction network of the Saccharomyces cerevisiae type 1 phosphatase Glc7. Logan MR, et al. BMC Genomics, 2008 Jul 15. PMID 18627629, Free PMC Article
  4. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549
  5. Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae. Kyriakou D, et al. BMC Biol, 2016 Dec 7. PMID 27927215, Free PMC Article

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_013980.1
  • Putative membrane protein, involved in salt tolerance; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; YMR253C is not an essential gene

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    775946..777190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182760.1 → NP_013980.1  TPA: uncharacterized protein YMR253C [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013980.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W080, Q04835, Q66R30
    UniProtKB/TrEMBL
    A6ZMW9, B3LME2, B5VQ20, C7GR98, C8ZFB9, G2WKW2, N1NXP2
    Conserved Domains (1) summary
    COG0697
    Location:119 → 383
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q04835.1

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