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[ Saccharomyces cerevisiae S288C ]

Gene ID: 854705, updated on 4-Jan-2025

Summary

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Primary source
SGD:S000006741
Locus tag
YNCI0002W
See related
AllianceGenome:SGD:S000006741
Gene type
tRNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable triplet codon-amino acid adaptor activity. Predicted to be involved in translational elongation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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Location:
chromosome: IX
Sequence:
Chromosome: IX; NC_001141.2 (175031..175103)

Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Xbp1p Neighboring gene glucan 1,4-alpha-glucosidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001141.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Yeast mitochondrial threonyl-tRNA synthetase recognizes tRNA isoacceptors by distinct mechanisms and promotes CUN codon reassignment. Ling J, et al. Proc Natl Acad Sci U S A, 2012 Feb 28. PMID 22343532, Free PMC Article
  2. The S. cerevisiae m6A-reader Pho92 promotes timely meiotic recombination by controlling key methylated transcripts. Scutenaire J, et al. Nucleic Acids Res, 2023 Jan 25. PMID 35934316, Free PMC Article
  3. tRNA genes and retroelements in the yeast genome. Hani J, et al. Nucleic Acids Res, 1998 Feb 1. PMID 9443958, Free PMC Article
  4. Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. Percudani R, et al. J Mol Biol, 1997 May 2. PMID 9159473
  5. A unique nucleosome arrangement, maintained actively by chromatin remodelers facilitates transcription of yeast tRNA genes. Kumar Y, et al. BMC Genomics, 2013 Jun 17. PMID 23767421, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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  • Threonine tRNA (tRNA-Thr), predicted by tRNAscan-SE analysis

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triplet codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
involved_in translational elongation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

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