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CAL4 Cal4p [ Saccharomyces cerevisiae S288C ]

Gene ID: 853468, updated on 18-Sep-2024

Summary

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Official Symbol
CAL4
Official Full Name
Cal4p
Primary source
SGD:S000003772
Locus tag
YJR011C
See related
AllianceGenome:SGD:S000003772; FungiDB:YJR011C; VEuPathDB:YJR011C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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Genomic context

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See CAL4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
1
Sequence:
Chromosome: X; NC_001142.9 (458641..459426, complement)

Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene sulfate adenylyltransferase Neighboring gene signal peptidase complex subunit SPC1 Neighboring gene uncharacterized protein Neighboring gene glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001142.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dedicated chaperones coordinate co-translational regulation of ribosomal protein production with ribosome assembly to preserve proteostasis. Pillet B, et al. Elife, 2022 Mar 31. PMID 35357307, Free PMC Article
  2. Global protein expression profiling of budding yeast in response to DNA damage. Lee MW, et al. Yeast, 2007 Mar. PMID 17351896
  3. Reverse recruitment: the Nup84 nuclear pore subcomplex mediates Rap1/Gcr1/Gcr2 transcriptional activation. Menon BB, et al. Proc Natl Acad Sci U S A, 2005 Apr 19. PMID 15817685, Free PMC Article
  4. Recruitment of Rpd3 to the telomere depends on the protein arginine methyltransferase Hmt1. Milliman EJ, et al. PLoS One, 2012. PMID 22953000, Free PMC Article
  5. Transcriptome-wide binding sites for components of the Saccharomyces cerevisiae non-poly(A) termination pathway: Nrd1, Nab3, and Sen1. Creamer TJ, et al. PLoS Genet, 2011 Oct. PMID 22028667, Free PMC Article

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Cal4p
NP_012545.1
  • Accessory component of the Ccr4-NOT complex; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001142.9 Reference assembly

    Range
    458641..459426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181669.1 → NP_012545.1  TPA: Cal4p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012545.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VWI7, P47086, Q6Q5N5
    UniProtKB/TrEMBL
    A6ZPX9, B3LQB1, B5VLH8, C7GWK2, C8ZBG7, G2WH23, N1P007
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P47086.1

Gene LinkOut

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