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uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 850984, updated on 4-Jan-2025

Summary

Official Full Name
uncharacterized protein
Primary source
SGD:S000004268
Locus tag
YLR278C
See related
AllianceGenome:SGD:S000004268; FungiDB:YLR278C; VEuPathDB:YLR278C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Is active in nucleus. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (699999..704024, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene ATP-dependent DNA/RNA helicase Neighboring gene cleavage polyadenylation factor subunit YSH1 Neighboring gene Rso55p Neighboring gene Put7p

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in biological_process ND
No biological Data available
more info
 
involved_in positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in nucleus HDA PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein
NP_013380.1
  • Zinc-cluster protein; GFP-fusion protein localizes to the nucleus; mutant shows moderate growth defect on caffeine; has a prion-domain like fragment that increases frequency of [URE3]; associates with rDNA chromatin in vivo; YLR278C is not an essential gene

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    699999..704024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182165.1NP_013380.1  TPA: uncharacterized protein YLR278C [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013380.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VYS5, Q05854
    UniProtKB/TrEMBL
    A7A1G2, B5VNI8
    Conserved Domains (2) summary
    cd12148
    Location:308730
    fungal_TF_MHR; fungal transcription factor regulatory middle homology region
    smart00066
    Location:3569
    GAL4; GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain