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XH domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844437, updated on 18-Sep-2024

Summary

Official Full Name
XH domain-containing protein
Primary source
TAIR:AT1G80970
Locus tag
AT1G80970
See related
Araport:AT1G80970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F23A5.33; F23A5_33
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Genomic context

Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (30420102..30421995)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Snf1 kinase interactor-like protein Neighboring gene Phospholipid/glycerol acyltransferase family protein Neighboring gene F-box and Leucine Rich Repeat domains containing protein Neighboring gene ncRNA Neighboring gene stress response NST1-like protein Neighboring gene XH domain-containing protein

General gene information

NM_001335027.1

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus  

General protein information

Preferred Names
XH domain-containing protein
NP_001185453.1
  • XH domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Domain of unknown function XH (InterPro:IPR005379); BEST Arabidopsis thaliana protein match is: XH domain-containing protein (TAIR:AT1G80990.1).
NP_001319435.1
  • XH domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XH (InterPro:IPR005379); BEST Arabidopsis thaliana protein match is: XH domain-containing protein (TAIR:AT1G80990.1); Has 32 Blast hits to 32 proteins in 10 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    30420102..30421995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001198524.2NP_001185453.1  XH domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185453.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4HVT8, Q9SAG3
    Conserved Domains (1) summary
    pfam03469
    Location:82207
    XH; XH domain
  2. NM_106745.4NP_178212.2  XH domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178212.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2E6M6, Q1LYU7, Q9SAG3
    Conserved Domains (1) summary
    pfam03469
    Location:82208
    XH; XH domain
  3. NM_001335028.1NP_001321423.1  XH domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2E6M6, Q1LYU7, Q9SAG3
    Conserved Domains (1) summary
    pfam03469
    Location:82208
    XH; XH domain
  4. NM_001335027.1NP_001319435.1  XH domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2E6M6, Q1LYU7, Q9SAG3
    Conserved Domains (1) summary
    pfam03469
    Location:82208
    XH; XH domain
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