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CBSX4 Cystathionine beta-synthase (CBS) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844349, updated on 18-Sep-2024

Summary

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Official Symbol
CBSX4
Official Full Name
Cystathionine beta-synthase (CBS) family protein
Primary source
TAIR:AT1G80090
Locus tag
AT1G80090
See related
Araport:AT1G80090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
CBS domain containing protein 4; F18B13.17; F18B13_17
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Genomic context

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See CBSX4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (30130218..30131940)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Pre-mRNA-processing-splicing factor Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene histidine phosphotransfer protein 6 Neighboring gene phloem protein 2-B11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AtPV42a and AtPV42b redundantly regulate reproductive development in Arabidopsis thaliana. Fang L, et al. PLoS One, 2011 Apr 20. PMID 21533063, Free PMC Article
  2. Purification, crystallization and preliminary X-ray diffraction analysis of a cystathionine beta-synthase domain-containing protein, CDCP2, from Arabidopsis thaliana. Jeong BC, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2008 Sep 1. PMID 18765915, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. In order to understand the characteristics of plant CBS domain-containing proteins, structural study of the cystathionine beta-synthase domain-containing protein CDCP2 has been initiated.
    Title: Purification, crystallization and preliminary X-ray diffraction analysis of a cystathionine beta-synthase domain-containing protein, CDCP2, from Arabidopsis thaliana.
Submit: New GeneRIF Correction

General gene information

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NM_001334956.1
NM_106658.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within developmental process involved in reproduction IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in embryo sac development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within pollen development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within pollen tube guidance IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in stamen development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Cystathionine beta-synthase (CBS) family protein
NP_001319425.1
  • Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G15330.1); Has 517 Blast hits to 517 proteins in 144 species: Archae - 0; Bacteria - 47; Metazoa - 83; Fungi - 146; Plants - 195; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    30130218..30131940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334956.1 → NP_001319425.1  Cystathionine beta-synthase (CBS) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HS24, Q8GXI9, Q9SSD0
    UniProtKB/TrEMBL
    A0A5S9WVX9, A0A654ES69

  2. NM_106658.3 → NP_178126.2  Cystathionine beta-synthase (CBS) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AMX3, A0A5S9WVX9, A0A654ES69
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GXI9.1

Gene LinkOut

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