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ECT8 evolutionarily conserved C-terminal region 8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844267, updated on 18-Sep-2024

Summary

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Official Symbol
ECT8
Official Full Name
evolutionarily conserved C-terminal region 8
Primary source
TAIR:AT1G79270
Locus tag
AT1G79270
See related
Araport:AT1G79270
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
evolutionarily conserved C-terminal region 8
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Genomic context

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See ECT8 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (29815470..29819678)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene AGC kinase 1.7 Neighboring gene nitrobindin heme-binding domain protein Neighboring gene nuclear pore anchor Neighboring gene tRNA-Lys Neighboring gene tRNA-Lys

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. N(6)-methyladenosine-mediated feedback regulation of abscisic acid perception via phase-separated ECT8 condensates in Arabidopsis. Wu X, et al. Nat Plants, 2024 Mar. PMID 38448725
  2. An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response. Carianopol CS, et al. Commun Biol, 2020 Mar 26. PMID 32218501, Free PMC Article
  3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
  4. In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings. Reichel M, et al. Plant Cell, 2016 Oct. PMID 27729395, Free PMC Article
  5. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N[6]-methyladenosine-mediated feedback regulation of abscisic acid perception via phase-separated ECT8 condensates in Arabidopsis.
    Title: N(6)-methyladenosine-mediated feedback regulation of abscisic acid perception via phase-separated ECT8 condensates in Arabidopsis.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001334878.1
NM_001334879.1
NM_001334880.1
NM_106577.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding HDA PubMed 
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
evolutionarily conserved C-terminal region 8
NP_565205.1
  • evolutionarily conserved C-terminal region 8 (ECT8); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 6 (TAIR:AT3G17330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29815470..29819678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106577.4 → NP_565205.1  evolutionarily conserved C-terminal region 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565205.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W7Z6, A0A7G2E665, Q9FPE7
    Conserved Domains (1) summary
    pfam04146
    Location:321 → 463
    YTH; YT521-B-like domain

  2. NM_001334880.1 → NP_001321641.1  evolutionarily conserved C-terminal region 8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ARJ2, A0A5S9WVT6, A0A654EQB5
    Conserved Domains (1) summary
    pfam04146
    Location:306 → 448
    YTH; YT521-B-like domain

  3. NM_001334878.1 → NP_001321640.1  evolutionarily conserved C-terminal region 8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ARJ2, A0A5S9WVT6, A0A654EQB5
    Conserved Domains (1) summary
    pfam04146
    Location:306 → 448
    YTH; YT521-B-like domain

  4. NM_001334879.1 → NP_001321639.1  evolutionarily conserved C-terminal region 8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ARJ2, A0A5S9WVT6, A0A654EQB5
    Conserved Domains (1) summary
    pfam04146
    Location:306 → 448
    YTH; YT521-B-like domain
Nucleotide Protein
Heading Accession and Version

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