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forkhead box protein, putative (DUF1644) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844114, updated on 18-Sep-2024

Summary

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Official Full Name
forkhead box protein, putative (DUF1644)
Primary source
TAIR:AT1G77770
Locus tag
AT1G77770
See related
Araport:AT1G77770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T32E8.10; T32E8_10
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (29246074..29248150, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nitrate reductase 1 Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene Glycosyl hydrolase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001334793.1
NM_106426.4
NM_202434.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
forkhead box protein, putative (DUF1644)
NP_177900.2
  • FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT4G08460.3); Has 291 Blast hits to 270 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
NP_974163.1
  • FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT4G08460.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29246074..29248150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106426.4 → NP_177900.2  forkhead box protein, putative (DUF1644) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177900.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2E6X8, Q84K51
    Conserved Domains (1) summary
    pfam07800
    Location:30 → 153
    DUF1644; Protein of unknown function (DUF1644)

  2. NM_202434.3 → NP_974163.1  forkhead box protein, putative (DUF1644) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974163.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WJR3, A0A384L361, A0A5S9WVC5, Q9CA17
    Conserved Domains (1) summary
    pfam07800
    Location:30 → 153
    DUF1644; Protein of unknown function (DUF1644)

  3. NM_001334793.1 → NP_001320636.1  forkhead box protein, putative (DUF1644) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WJR3, A0A384L361, A0A5S9WVC5, Q9CA17
    Conserved Domains (1) summary
    pfam07800
    Location:30 → 153
    DUF1644; Protein of unknown function (DUF1644)
Nucleotide Protein
Heading Accession and Version

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