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Acyl-CoA N-acyltransferases (NAT) superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844090, updated on 18-Sep-2024

Summary

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Official Full Name
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Primary source
TAIR:AT1G77540
Locus tag
AT1G77540
See related
Araport:AT1G77540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T5M16.13; T5M16_13
Summary
Encodes a H3/H4 histone acetyltransferase. Belongs to the GNAT family, whose many members are involved in histone acetylation and chromatin remodeling, and are important for the regulation of cell growth and development.
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (29137626..29138282, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene O-methyltransferase family protein Neighboring gene defensin-like protein Neighboring gene O-methyltransferase family protein Neighboring gene tubulin-tyrosine ligase Neighboring gene tRNA-Gln Neighboring gene Winged helix-turn-helix transcription repressor DNA-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure of Arabidopsis thaliana At1g77540 protein, a minimal acetyltransferase from the COG2388 family. Tyler RC, et al. Biochemistry, 2006 Dec 5. PMID 17128971, Free PMC Article
  2. In-depth proteome analysis of Arabidopsis leaf peroxisomes combined with in vivo subcellular targeting verification indicates novel metabolic and regulatory functions of peroxisomes. Reumann S, et al. Plant Physiol, 2009 May. PMID 19329564, Free PMC Article
  3. Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. Ito J, et al. J Proteome Res, 2011 Apr 1. PMID 21166475
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. At1g77540 was found to adopt a fold similar to that of GCN5-related N-acetyltransferases
    Title: Structure of Arabidopsis thaliana At1g77540 protein, a minimal acetyltransferase from the COG2388 family.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_106403.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables histone acetyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
NOT located_in cytosol RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in peroxisome IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Acyl-CoA N-acyltransferases (NAT) superfamily protein
NP_565157.1
  • Acyl-CoA N-acyltransferases (NAT) superfamily protein; CONTAINS InterPro DOMAIN/s: Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G21770.1); Has 329 Blast hits to 329 proteins in 159 species: Archae - 6; Bacteria - 264; Metazoa - 8; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29137626..29138282 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106403.4 → NP_565157.1  Acyl-CoA N-acyltransferases (NAT) superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565157.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2HIN3, Q8LEN2, Q9CAQ2
    UniProtKB/TrEMBL
    A0A178W956, A0A5S9WV71, A0A7G2E3N9
    Conserved Domains (1) summary
    pfam14542
    Location:27 → 102
    Acetyltransf_CG; GCN5-related N-acetyl-transferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9CAQ2.2

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