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organic solute transporter ostalpha protein (DUF300) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844058, updated on 18-Sep-2024

Summary

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Official Full Name
organic solute transporter ostalpha protein (DUF300)
Primary source
TAIR:AT1G77220
Locus tag
AT1G77220
See related
Araport:AT1G77220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T14N5.8; T14N5_8
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (29012674..29015846)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene sugar transporter 14 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ncRNA Neighboring gene AMP-dependent synthetase and ligase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Vacuole Integrity Maintained by DUF300 Proteins Is Required for Brassinosteroid Signaling Regulation. Liu Q, et al. Mol Plant, 2018 Apr 2. PMID 29288738
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_106371.3

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of brassinosteroid mediated signaling pathway IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within vacuole organization IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within vesicle-mediated transport to the plasma membrane IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
organic solute transporter ostalpha protein (DUF300)
NP_565152.1
  • Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT4G38360.2); Has 852 Blast hits to 850 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 289; Fungi - 195; Plants - 246; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29012674..29015846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334770.1 → NP_001320456.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AMV5
    Conserved Domains (1) summary
    pfam03619
    Location:43 → 320
    Solute_trans_a; Organic solute transporter Ostalpha

  2. NM_106371.3 → NP_565152.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565152.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80656, Q94CA0
    UniProtKB/TrEMBL
    A0A178WIR5, A0A5S9WV42, A0A654EPQ1
    Conserved Domains (1) summary
    pfam03619
    Location:43 → 320
    Solute_trans_a; Organic solute transporter Ostalpha
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q94CA0.1

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