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Auxin efflux carrier family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843986, updated on 18-Sep-2024

Summary

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Official Full Name
Auxin efflux carrier family protein
Primary source
TAIR:AT1G76530
Locus tag
AT1G76530
See related
Araport:AT1G76530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14G6.13; F14G6_13; PILS4; PIN-LIKES 4
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Sequence:
Chromosome: 1; NC_003070.9 (28718069..28720371)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ARID/BRIGHT DNA-binding domain-containing protein Neighboring gene Auxin efflux carrier family protein Neighboring gene cyclin-dependent kinase B2;1 Neighboring gene Phosphofructokinase family protein Neighboring gene CP12 domain-containing protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants. Barbez E, et al. Nature, 2012 Apr 15. PMID 22504182
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PILS4 is a member of the PIN-LIKES (PILS) protein family of putative auxin carriers residing at the endoplasmic reticulum.
    Title: A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants.
Submit: New GeneRIF Correction

General gene information

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NM_001334730.1
NM_001334731.1
NM_001334732.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in endoplasmic reticulum to cytosol auxin transport IEA
Inferred from Electronic Annotation
more info
  
involved_in response to auxin IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Auxin efflux carrier family protein
NP_001319388.1
  • Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76520.2); Has 560 Blast hits to 535 proteins in 95 species: Archae - 4; Bacteria - 2; Metazoa - 0; Fungi - 181; Plants - 324; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28718069..28720371
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334730.1 → NP_001319388.1  Auxin efflux carrier family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C9K4
    UniProtKB/TrEMBL
    A0A5S9WUW8, A0A654EUM5
    Conserved Domains (1) summary
    pfam03547
    Location:11 → 407
    Mem_trans; Membrane transport protein

  2. NM_001334731.1 → NP_001321045.1  Auxin efflux carrier family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C9K4
    UniProtKB/TrEMBL
    A0A5S9WUW8, A0A654EUM5
    Conserved Domains (1) summary
    pfam03547
    Location:11 → 407
    Mem_trans; Membrane transport protein

  3. NM_001334732.1 → NP_001321044.1  Auxin efflux carrier family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8APP3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C9K4.1

Gene LinkOut

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