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ARAC5 RAC-like GTP binding protein 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843917, updated on 18-Sep-2024

Summary

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Official Symbol
ARAC5
Official Full Name
RAC-like GTP binding protein 5
Primary source
TAIR:AT1G75840
Locus tag
AT1G75840
See related
Araport:AT1G75840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA GERANYLGERANYLATED PROTEIN 3; ATGP3; ATROP4; RAC-LIKE GTP BINDING PROTEIN; RAC-like GTP binding protein 5; RHO-LIKE GTP BINDING PROTEIN 4; ROP4
Summary
Belongs to the plant-specific ROP group of Rho GTPases; localized to the plasma membrane of tips of root hairs; involved in polar growth control.
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Genomic context

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See ARAC5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (28475649..28477802)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene low-molecular-weight cysteine-rich 67 Neighboring gene VPS35 homolog B Neighboring gene DNA ligase Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The phosphomimetic mutation of an evolutionarily conserved serine residue affects the signaling properties of Rho of plants (ROPs). Fodor-Dunai C, et al. Plant J, 2011 May. PMID 21309864
  2. Structural evidence for a common intermediate in small G protein-GEF reactions. Thomas C, et al. Mol Cell, 2007 Jan 12. PMID 17218277
  3. Arabidopsis thaliana Rop GTPases are localized to tips of root hairs and control polar growth. Molendijk AJ, et al. EMBO J, 2001 Jun 1. PMID 11387211, Free PMC Article
  4. Localization of AtROP4 and AtROP6 and interaction with the guanine nucleotide dissociation inhibitor AtRhoGDI1 from Arabidopsis. Bischoff F, et al. Plant Mol Biol, 2000 Feb. PMID 10798620
  5. Cloning and characterization of rac-like cDNAs from Arabidopsis thaliana. Winge P, et al. Plant Mol Biol, 1997 Nov. PMID 9349271

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_106234.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTP binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables GTP binding TAS
Traceable Author Statement
more info
 PubMed 
enables GTPase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within pollen tube growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in root hair elongation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in root hair initiation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion HDA PubMed 
located_in nucleolus HDA PubMed 
located_in nucleus HDA PubMed 
located_in phragmoplast HDA PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
RAC-like GTP binding protein 5
NP_177712.1
  • RAC-like GTP binding protein 5 (ARAC5); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 2 (TAIR:AT1G20090.1); Has 24632 Blast hits to 24606 proteins in 682 species: Archae - 9; Bacteria - 69; Metazoa - 12688; Fungi - 3833; Plants - 2700; Viruses - 20; Other Eukaryotes - 5313 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28475649..28477802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106234.3 → NP_177712.1  RAC-like GTP binding protein 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177712.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O48545, Q38937, Q9LQT0, Q9ZRD5
    UniProtKB/TrEMBL
    A0A178W747, A0A5S9WUP4, A0A7G2ESY8
    Conserved Domains (1) summary
    cd04133
    Location:6 → 178
    Rop_like; Rho-related protein from plants (Rop)-like
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q38937.1

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