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RRA2 Nucleotide-diphospho-sugar transferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843848, updated on 18-Sep-2024

Summary

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Official Symbol
RRA2
Official Full Name
Nucleotide-diphospho-sugar transferase family protein
Primary source
TAIR:AT1G75110
Locus tag
AT1G75110
See related
Araport:AT1G75110
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F9E10.4; F9E10_4; REDUCED RESIDUAL ARABINOSE 2
Summary
Encodes an arabinosyltransferase that modifies extensin proteins in root hair cells.
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Genomic context

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See RRA2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (28194005..28196033, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Brassinosteroid signaling positive regulator (BZR1) family protein Neighboring gene ncRNA Neighboring gene DNA glycosylase superfamily protein Neighboring gene ncRNA Neighboring gene J-domain protein required for chloroplast accumulation response 1 Neighboring gene Nucleotide-diphospho-sugar transferase family protein Neighboring gene plastid transcriptionally active protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization of two Arabidopsis thaliana glycosyltransferase mutants, rra1 and rra2, which have a reduced residual arabinose content in a polymer tightly associated with the cellulosic wall residue. Egelund J, et al. Plant Mol Biol, 2007 Jul. PMID 17401635
  2. O-glycosylated cell wall proteins are essential in root hair growth. Velasquez SM, et al. Science, 2011 Jun 17. PMID 21680836
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. RRA-2 plays a role in the arabinosylation of cell wall components.
    Title: Molecular characterization of two Arabidopsis thaliana glycosyltransferase mutants, rra1 and rra2, which have a reduced residual arabinose content in a polymer tightly associated with the cellulosic wall residue.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_106167.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within root hair cell development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Nucleotide-diphospho-sugar transferase family protein
NP_565102.1
  • REDUCED RESIDUAL ARABINOSE 2 (RRA2); LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G19360.1); Has 313 Blast hits to 307 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28194005..28196033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106167.3 → NP_565102.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565102.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LCK7, Q9C9Q5
    UniProtKB/TrEMBL
    A0A5S9WUI8, A0A654EZT8
    Conserved Domains (1) summary
    pfam03407
    Location:183 → 405
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C9Q5.1

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