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CPK30 calcium-dependent protein kinase 30 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843813, updated on 18-Sep-2024

Summary

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Official Symbol
CPK30
Official Full Name
calcium-dependent protein kinase 30
Primary source
TAIR:AT1G74740
Locus tag
AT1G74740
See related
Araport:AT1G74740
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCPK30; CALCIUM-DEPENDENT PROTEIN KINASE 1A; calcium-dependent protein kinase 30; CDPK1A; F25A4.29; F25A4_29
Summary
member of Calcium Dependent Protein Kinase
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Genomic context

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See CPK30 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (28079946..28082671, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Neighboring gene transmembrane protein, putative (DUF1118) Neighboring gene ncRNA Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene zinc ion binding protein Neighboring gene Nodulin-like / Major Facilitator Superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A calcium-dependent protein kinase is involved in plant hormone signal transduction in Arabidopsis. Yuan X, et al. Zhi Wu Sheng Li Yu Fen Zi Sheng Wu Xue Xue Bao, 2007 Jun. PMID 17556810
  2. Ca2+-dependent protein kinases and stress signal transduction in plants. Sheen J. Science, 1996 Dec 13. PMID 8943201
  3. Arabidopsis calcium-dependent protein kinase AtCPK32 interacts with ABF4, a transcriptional regulator of abscisic acid-responsive gene expression, and modulates its activity. Choi HI, et al. Plant Physiol, 2005 Dec. PMID 16299177, Free PMC Article
  4. Differential binding of calmodulin-related proteins to their targets revealed through high-density Arabidopsis protein microarrays. Popescu SC, et al. Proc Natl Acad Sci U S A, 2007 Mar 13. PMID 17360592, Free PMC Article
  5. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The results suggest that AtCPK30 acts as the calcium sensor and involved in the hormone-signaling pathways.
    Title: A calcium-dependent protein kinase is involved in plant hormone signal transduction in Arabidopsis.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_106132.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase activity TAS
Traceable Author Statement
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within abscisic acid-activated signaling pathway TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
calcium-dependent protein kinase 30
NP_177612.2
  • calcium-dependent protein kinase 30 (CPK30); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 1 (TAIR:AT1G18890.1); Has 129906 Blast hits to 123880 proteins in 3943 species: Archae - 178; Bacteria - 14335; Metazoa - 48347; Fungi - 17163; Plants - 26785; Viruses - 481; Other Eukaryotes - 22617 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28079946..28082671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106132.4 → NP_177612.2  calcium-dependent protein kinase 30 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177612.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SBZ3, Q9SSF8
    UniProtKB/TrEMBL
    A0A178W4G7, A0A5S9WUE6
    Conserved Domains (2) summary
    PTZ00184
    Location:353 → 497
    PTZ00184; calmodulin; Provisional
    cd05117
    Location:58 → 316
    STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SSF8.1

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