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MYB31 myb domain protein 31 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843804, updated on 18-Sep-2024

Summary

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Official Symbol
MYB31
Official Full Name
myb domain protein 31
Primary source
TAIR:AT1G74650
Locus tag
AT1G74650
See related
Araport:AT1G74650
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 31; ATMYB31; ATY13; F1M20.33; F1M20_33; myb domain protein 31
Summary
Member of the R2R3 factor gene family.
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Genomic context

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See MYB31 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (28041146..28043022)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene mini zinc finger 1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AtMYB31 is a wax regulator associated with reproductive development in Arabidopsis. Shi L, et al. Planta, 2022 Jul 4. PMID 35781548
  2. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
  3. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001334658.1
NM_001334659.1
NM_106123.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
myb domain protein 31
NP_177603.1
  • myb domain protein 31 (MYB31); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 9009 Blast hits to 8400 proteins in 544 species: Archae - 0; Bacteria - 6; Metazoa - 828; Fungi - 478; Plants - 5790; Viruses - 3; Other Eukaryotes - 1904 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28041146..28043022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106123.4 → NP_177603.1  myb domain protein 31 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177603.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WUC8, A0A7G2E8Y1, Q9CA52
    Conserved Domains (1) summary
    PLN03212
    Location:5 → 117
    PLN03212; Transcription repressor MYB5; Provisional

  2. NM_001334658.1 → NP_001320341.1  myb domain protein 31 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W7D2, A0A1P8AMJ1, A0A384KT80
    Conserved Domains (1) summary
    PLN03212
    Location:7 → 36
    PLN03212; Transcription repressor MYB5; Provisional

  3. NM_001334659.1 → NP_001320340.1  myb domain protein 31 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AMH1
    Conserved Domains (1) summary
    PLN03212
    Location:1 → 41
    PLN03212; Transcription repressor MYB5; Provisional
Nucleotide Protein
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