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polarity axis stabilization protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843730, updated on 18-Sep-2024

Summary

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Official Full Name
polarity axis stabilization protein
Primary source
TAIR:AT1G73930
Locus tag
AT1G73930
See related
Araport:AT1G73930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2P9.20; F2P9_20
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (27795040..27798005, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene actin-related proteins 4A Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene tumor necrosis factor receptor family protein Neighboring gene Transmembrane Fragile-X-F-associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001036201.2
NM_106052.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
polarity axis stabilization protein
NP_001031278.1
  • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1630 (InterPro:IPR012860); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_177533.1
  • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1630 (InterPro:IPR012860); Has 290 Blast hits to 263 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 30; Plants - 49; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    27795040..27798005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001036201.2 → NP_001031278.1  polarity axis stabilization protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031278.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WLK4, B9DFN8, Q9C9B4
    Conserved Domains (2) summary
    pfam08616
    Location:227 → 319
    SPA; Stabilization of polarity axis
    cl11519
    Location:124 → 204
    DENN; DENN (AEX-3) domain

  2. NM_106052.3 → NP_177533.1  polarity axis stabilization protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177533.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WLK4, B9DFN8, Q9C9B4
    Conserved Domains (2) summary
    pfam08616
    Location:227 → 319
    SPA; Stabilization of polarity axis
    cl11519
    Location:124 → 204
    DENN; DENN (AEX-3) domain
Nucleotide Protein
Heading Accession and Version

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