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Root hair defective 3 GTP-binding protein (RHD3) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843627, updated on 18-Sep-2024

Summary

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Official Full Name
Root hair defective 3 GTP-binding protein (RHD3)
Primary source
TAIR:AT1G72960
Locus tag
AT1G72960
See related
Araport:AT1G72960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3N23.16; F3N23_16
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Genomic context

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Location:
chromosome: 1
Exon count:
22
Sequence:
Chromosome: 1; NC_003070.9 (27446069..27451067)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Toll-Interleukin-Resistance (TIR) domain-containing protein Neighboring gene ncRNA Neighboring gene Disease resistance protein (TIR-NBS class) Neighboring gene Glucose-methanol-choline (GMC) oxidoreductase family protein Neighboring gene LOB domain-containing protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Root hair defective 3 GTP-binding protein (RHD3)
NP_177439.2
  • Root hair defective 3 GTP-binding protein (RHD3); CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT3G13870.1); Has 479 Blast hits to 469 proteins in 183 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 185; Plants - 127; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    27446069..27451067
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105954.3 → NP_177439.2  Root hair defective 3 GTP-binding protein (RHD3) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177439.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SSN0
    UniProtKB/TrEMBL
    A0A178WM92
    Conserved Domains (1) summary
    pfam05879
    Location:48 → 790
    RHD3; Root hair defective 3 GTP-binding protein (RHD3)

  2. NM_001334558.1 → NP_001321991.1  Root hair defective 3 GTP-binding protein (RHD3) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WM92, A0A1P8ASL0
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SSN0.2

Gene LinkOut

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