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ELF4-L2 ELF4-like 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843595, updated on 18-Sep-2024

Summary

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Official Symbol
ELF4-L2
Official Full Name
ELF4-like 2
Primary source
TAIR:AT1G72630
Locus tag
AT1G72630
See related
Araport:AT1G72630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ELF4-like 2; F28P22.18; F28P22_18
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Genomic context

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See ELF4-L2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (27344181..27345585)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene germin-like protein 1 Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrating ELF4 into the circadian system through combined structural and functional studies. Kolmos E, et al. HFSP J, 2009 Oct. PMID 20357892, Free PMC Article
  2. Identification of Evening Complex Associated Proteins in Arabidopsis by Affinity Purification and Mass Spectrometry. Huang H, et al. Mol Cell Proteomics, 2016 Jan. PMID 26545401, Free PMC Article
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_105922.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein homodimerization activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in photoperiodism IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in positive regulation of circadian rhythm IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
ELF4-like 2
NP_565044.1
  • ELF4-like 2 (ELF4-L2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 4 (TAIR:AT1G17455.2); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    27344181..27345585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105922.4 → NP_565044.1  ELF4-like 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565044.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q94BS8, Q9CAH8
    UniProtKB/TrEMBL
    A0A178WCV4, A0A5S9WTS4
    Conserved Domains (1) summary
    pfam07011
    Location:18 → 100
    DUF1313; Protein of unknown function (DUF1313)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q94BS8.1

Gene LinkOut

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