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Transmembrane amino acid transporter family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843494, updated on 18-Sep-2024

Summary

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Official Full Name
Transmembrane amino acid transporter family protein
Primary source
TAIR:AT1G71680
Locus tag
AT1G71680
See related
Araport:AT1G71680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14O23.2; F14O23_2
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (26944587..26947219)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene ncRNA Neighboring gene Protein kinase superfamily protein Neighboring gene glucuronoxylan 4-O-methyltransferase-like protein (DUF579) Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene AGAMOUS-like 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001334503.1
NM_105822.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Transmembrane amino acid transporter family protein
NP_565019.2
  • Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: lysine histidine transporter 1 (TAIR:AT5G40780.2); Has 4295 Blast hits to 4286 proteins in 279 species: Archae - 3; Bacteria - 60; Metazoa - 1288; Fungi - 708; Plants - 1649; Viruses - 2; Other Eukaryotes - 585 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    26944587..26947219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105822.3 → NP_565019.2  Transmembrane amino acid transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565019.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C9J0, Q9M9H9
    UniProtKB/TrEMBL
    A0A178WMN6, A0A7G2E3X3
    Conserved Domains (1) summary
    cl00456
    Location:37 → 432
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. NM_001334503.1 → NP_001320666.1  Transmembrane amino acid transporter family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ANJ9, A0A7G2E3X3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C9J0.2

Gene LinkOut

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