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EXS (ERD1/XPR1/SYG1) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843280, updated on 18-Sep-2024

Summary

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Official Full Name
EXS (ERD1/XPR1/SYG1) family protein
Primary source
TAIR:AT1G69480
Locus tag
AT1G69480
See related
Araport:AT1G69480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10D13.13; F10D13_13
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Sequence:
Chromosome: 1; NC_003070.9 (26113990..26117955, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene emp24/gp25L/p24 family/GOLD family protein Neighboring gene heat shock protein-binding protein Neighboring gene Ribosomal L32p protein family Neighboring gene NAC-like, activated by AP3/PI

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_105615.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
EXS (ERD1/XPR1/SYG1) family protein
NP_177107.2
  • EXS (ERD1/XPR1/SYG1) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: stem, sepal, stamen, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1143 Blast hits to 1074 proteins in 207 species: Archae - 0; Bacteria - 12; Metazoa - 268; Fungi - 392; Plants - 315; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    26113990..26117955 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334410.1 → NP_001320450.1  EXS (ERD1/XPR1/SYG1) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6R8G0, Q9C789
    UniProtKB/TrEMBL
    A0A5S9WTP0

  2. NM_105615.4 → NP_177107.2  EXS (ERD1/XPR1/SYG1) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177107.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6R8G0, Q9C789
    UniProtKB/TrEMBL
    A0A5S9WTP0
    Conserved Domains (3) summary
    cd14476
    Location:2 → 318
    SPX_PHO1_like; SPX domain of the plant protein PHOSPHATE1 (PHO1)
    pfam03105
    Location:3 → 322
    SPX; SPX domain
    pfam03124
    Location:415 → 749
    EXS; EXS family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6R8G0.1

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