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PAN bZIP transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843194, updated on 18-Sep-2024

Summary

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Official Symbol
PAN
Official Full Name
bZIP transcription factor family protein
Primary source
TAIR:AT1G68640
Locus tag
AT1G68640
See related
Araport:AT1G68640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F24J5.12; F24J5_12; PERIANTHIA; TGA8; TGACG sequence-specific binding protein 8
Summary
Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants.
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Genomic context

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See PAN in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Sequence:
Chromosome: 1; NC_003070.9 (25769576..25772650, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene PLANT CADMIUM RESISTANCE 11 Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene PLAC8 family protein Neighboring gene ncRNA Neighboring gene Uncharacterized protein family (UPF0016) Neighboring gene Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein Neighboring gene myb-like transcription factor family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. Gutsche N, et al. PLoS One, 2016. PMID 27128442, Free PMC Article
  2. Dual roles of the bZIP transcription factor PERIANTHIA in the control of floral architecture and homeotic gene expression. Maier AT, et al. Development, 2009 May. PMID 19395639, Free PMC Article
  3. Floral stem cell termination involves the direct regulation of AGAMOUS by PERIANTHIA. Das P, et al. Development, 2009 May. PMID 19395638
  4. The ROXY1 C-terminal L**LL motif is essential for the interaction with TGA transcription factors. Li S, et al. Plant Physiol, 2011 Dec. PMID 21960138, Free PMC Article
  5. Nuclear activity of ROXY1, a glutaredoxin interacting with TGA factors, is required for petal development in Arabidopsis thaliana. Li S, et al. Plant Cell, 2009 Feb. PMID 19218396, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The N-terminal PAN cysteines participate in a redox-dependent control of the PAN interaction with a highly conserved regulatory AG cis-element, emphasizing the importance of redox-modifications in the regulation of flower developmental processes.
    Title: The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
  2. PAN and AG are engaged in a negative-feedback loop, which might be mediated by the stem-cell-inducing transcription factor WUSCHEL (WUS).
    Title: Dual roles of the bZIP transcription factor PERIANTHIA in the control of floral architecture and homeotic gene expression.
  3. PERIANTHIA (PAN) plays a role in regulating stem cell fate by directly controlling AG expression and suggest that this activity is spatially restricted to the centermost region of the AG expression domain.
    Title: Floral stem cell termination involves the direct regulation of AGAMOUS by PERIANTHIA.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_105536.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables DNA-binding transcription factor activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables cis-regulatory region sequence-specific DNA binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of flower development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
bZIP transcription factor family protein
NP_177031.1
  • PERIANTHIA (PAN); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 796 Blast hits to 796 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 33; Plants - 710; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    25769576..25772650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105536.4 → NP_177031.1  bZIP transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177031.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SX27, Q9ZPJ6
    UniProtKB/TrEMBL
    A0A5S9WTN1, A0A654EM88
    Conserved Domains (2) summary
    cd14708
    Location:166 → 214
    bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
    pfam14144
    Location:251 → 324
    DOG1; Seed dormancy control
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SX27.1

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