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F-box family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843059, updated on 18-Sep-2024

Summary

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Official Full Name
F-box family protein
Primary source
TAIR:AT1G67390
Locus tag
AT1G67390
See related
Araport:AT1G67390
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F1N21.21
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (25244690..25247343)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene NADH-ubiquinone oxidoreductase Neighboring gene Rubber elongation factor protein (REF) Neighboring gene ncRNA Neighboring gene DNA-binding HORMA family protein Neighboring gene ELMO/CED-12 family protein Neighboring gene Exostosin family protein Neighboring gene Zn-dependent exopeptidases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
F-box family protein
NP_176906.1
  • F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G60790.1); Has 1872 Blast hits to 1854 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1872; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    25244690..25247343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105406.2 → NP_176906.1  F-box family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176906.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FYF4
    UniProtKB/TrEMBL
    A0A654END1
    Conserved Domains (2) summary
    sd00032
    Location:201 → 225
    LRR_2; leucine-rich repeat [structural motif]
    pfam00646
    Location:41 → 88
    F-box; F-box domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FYF4.1

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