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Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843051, updated on 18-Sep-2024

Summary

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Official Full Name
Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain
Primary source
TAIR:AT1G67310
Locus tag
AT1G67310
See related
Araport:AT1G67310
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F1N21.13
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Sequence:
Chromosome: 1; NC_003070.9 (25198182..25203126, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glyoxal oxidase-related protein Neighboring gene Major facilitator superfamily protein Neighboring gene DNA primase, large subunit family Neighboring gene Ran BP2/NZF zinc finger-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana. Jones AM, et al. J Proteomics, 2009 Apr 13. PMID 19245862
  2. A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants. Yang T, et al. J Biol Chem, 2002 Nov 22. PMID 12218065
  3. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_105399.2

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain
NP_176899.2
  • Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Cell surface receptor IPT/TIG (InterPro:IPR002909), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: signal responsive 1 (TAIR:AT2G22300.2); Has 4214 Blast hits to 2978 proteins in 268 species: Archae - 9; Bacteria - 179; Metazoa - 1855; Fungi - 220; Plants - 413; Viruses - 4; Other Eukaryotes - 1534 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    25198182..25203126 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105399.2 → NP_176899.2  Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176899.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FYG2
    UniProtKB/TrEMBL
    A0A178WML9, A0A654ENF8
    Conserved Domains (5) summary
    smart00015
    Location:877 → 899
    IQ; Calmodulin-binding motif
    sd00045
    Location:680 → 717
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:447 → 530
    TIG; IPT/TIG domain
    pfam03859
    Location:45 → 157
    CG-1; CG-1 domain
    pfam12796
    Location:652 → 739
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FYG2.1

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