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TRM22 DnaA initiator-associating protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843024, updated on 18-Sep-2024

Summary

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Official Symbol
TRM22
Official Full Name
DnaA initiator-associating protein
Primary source
TAIR:AT1G67040
Locus tag
AT1G67040
See related
Araport:AT1G67040
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F1O19.10; F1O19_10; TON1 Recruiting Motif 22
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Genomic context

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See TRM22 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (25019105..25022704, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene zinc finger protein 6 Neighboring gene ncRNA Neighboring gene homeobox Hox-B3-like protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene membrane-associated kinase regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_105374.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
DnaA initiator-associating protein
NP_176875.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.3); Has 89 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    25019105..25022704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334266.1 → NP_001321671.1  DnaA initiator-associating protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ARP0, A0A654EM16

  2. NM_105374.2 → NP_176875.1  DnaA initiator-associating protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176875.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WSX1, Q9FZH7
    Conserved Domains (1) summary
    pfam14383
    Location:87 → 117
    VARLMGL; DUF761-associated sequence motif
Nucleotide Protein
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