BGLU22 Glycosyl hydrolase superfamily protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: BGLU22
Official Full Name: Glycosyl hydrolase superfamily protein
Primary source: TAIR:AT1G66280
Locus tag: AT1G66280
See related: Araport:AT1G66280
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: T27F4.3; T27F4_3
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Genomic context

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See BGLU22 in Genome Data Viewer

Location:: chromosome: 1

Exon count:: 13

Sequence:: Chromosome: 1; NC_003070.9 (24706512..24709996, complement)

Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_105299.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables beta-glucosidase activity	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
involved_in carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cellular response to cold	IEP Inferred from Expression Pattern more info	PubMed
acts_upstream_of_or_within cellular response to salt stress	IEP Inferred from Expression Pattern more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in endoplasmic reticulum	HDA more info	PubMed
located_in mitochondrion	HDA more info	PubMed
located_in plasmodesma	HDA more info	PubMed

General protein information

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Preferred Names: Glycosyl hydrolase superfamily protein

NP_176802.1

BGLU22; FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to salt stress, cellular response to cold, cellular response to salt stress; LOCATED IN: membrane; EXPRESSED IN: root, callus, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G66270.1); Has 11192 Blast hits to 10883 proteins in 1464 species: Archae - 140; Bacteria - 7710; Metazoa - 697; Fungi - 202; Plants - 1444; Viruses - 0; Other Eukaryotes - 999 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003070.9 Reference assembly

Range

24706512..24709996 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_105299.3 → NP_176802.1 Glycosyl hydrolase superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_176802.1

Status: REVIEWED

UniProtKB/Swiss-Prot

C0Z2N5, Q9C8Y9

UniProtKB/TrEMBL

A0A178W7G9, A0A5S9WSB9

Conserved Domains (1) summary

cl23725
Location:38 → 509

Glyco_hydro; Glycosyl hydrolases