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hypothetical protein (DUF577) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842920, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (DUF577)
Primary source
TAIR:AT1G66060
Locus tag
AT1G66060
See related
Araport:AT1G66060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15E12.9; F15E12_9
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (24593915..24595544, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene reverse transcriptase-like protein Neighboring gene Zinc finger (C3HC4-type RING finger) family protein Neighboring gene Translation initiation factor eIF3 subunit Neighboring gene hikeshi-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_105277.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
hypothetical protein (DUF577)
NP_176780.1
  • Family of unknown function (DUF577); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF577 (InterPro:IPR007598); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF577) (TAIR:AT1G66000.1); Has 82 Blast hits to 52 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    24593915..24595544 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105277.2 → NP_176780.1  hypothetical protein (DUF577) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176780.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WP75, Q9C8D9
    Conserved Domains (1) summary
    pfam04510
    Location:108 → 275
    DUF577; Family of unknown function (DUF577)
Nucleotide Protein
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