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RING/U-box superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842687, updated on 18-Sep-2024

Summary

Official Full Name
RING/U-box superfamily protein
Primary source
TAIR:AT1G63840
Locus tag
AT1G63840
See related
Araport:AT1G63840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T12P18.14; T12P18_14
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Genomic context

Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (23689603..23690807, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene PLAC8 family protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene BTB/POZ domain-containing protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
RING/U-box superfamily protein
NP_176569.1
  • RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41400.1); Has 7174 Blast hits to 7158 proteins in 242 species: Archae - 0; Bacteria - 0; Metazoa - 1914; Fungi - 486; Plants - 3881; Viruses - 16; Other Eukaryotes - 877 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    23689603..23690807 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105059.4NP_176569.1  RING/U-box superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176569.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WBA6, A0A654EMF7, Q9CAJ8
    Conserved Domains (1) summary
    cl17238
    Location:88133
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain