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Peptidase M1 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842681, updated on 18-Sep-2024

Summary

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Official Full Name
Peptidase M1 family protein
Primary source
TAIR:AT1G63770
Locus tag
AT1G63770
See related
Araport:AT1G63770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F24D7.4; F24D7_4
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Genomic context

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Location:
chromosome: 1
Exon count:
34
Sequence:
Chromosome: 1; NC_003070.9 (23657506..23664793, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene Ribosomal RNA processing Brix domain protein Neighboring gene tRNA-Thr

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A puromycin-sensitive aminopeptidase is essential for meiosis in Arabidopsis thaliana. Sánchez-Morán E, et al. Plant Cell, 2004 Nov. PMID 15522847, Free PMC Article
  2. A multi-step peptidolytic cascade for amino acid recovery in chloroplasts. Teixeira PF, et al. Nat Chem Biol, 2017 Jan. PMID 27820795
  3. Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. Shimaoka T, et al. Plant Cell Physiol, 2004 Jun. PMID 15215502
  4. Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Bindschedler LV, et al. Phytochemistry, 2008 Jul. PMID 18538804
  5. The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Peltier JB, et al. Mol Cell Proteomics, 2006 Jan. PMID 16207701

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001124071.5
NM_001160970.1
NM_001334124.1
NM_001334125.1
NM_001334126.1
NM_105053.3
NM_202354.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in apoplast HDA PubMed 
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope HDA PubMed 
located_in chloroplast stroma HDA PubMed 
located_in nucleus HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 
located_in vacuole HDA PubMed 

General protein information

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Preferred Names
Peptidase M1 family protein
NP_001117543.4
  • Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 7901 Blast hits to 7867 proteins in 1782 species: Archae - 112; Bacteria - 3789; Metazoa - 1713; Fungi - 432; Plants - 227; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink).
NP_001154442.1
  • Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 7874 Blast hits to 7842 proteins in 1773 species: Archae - 112; Bacteria - 3764; Metazoa - 1717; Fungi - 430; Plants - 225; Viruses - 0; Other Eukaryotes - 1626 (source: NCBI BLink).
NP_001319311.1
  • Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1).
NP_176563.3
  • Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 7682 Blast hits to 7653 proteins in 1759 species: Archae - 112; Bacteria - 3674; Metazoa - 1678; Fungi - 451; Plants - 221; Viruses - 0; Other Eukaryotes - 1546 (source: NCBI BLink).
NP_974083.1
  • Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    23657506..23664793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001160970.1 → NP_001154442.1  Peptidase M1 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154442.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W6H1, A0A7G2E3S4
    Conserved Domains (2) summary
    cd09600
    Location:11 → 893
    M1_APN_1; Peptidase M1 family containing Aminopeptidase N
    PRK14015
    Location:1 → 895
    pepN; aminopeptidase N; Provisional

  2. NM_001124071.5 → NP_001117543.4  Peptidase M1 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001117543.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WT78, F4I3R0
    Conserved Domains (2) summary
    cd09600
    Location:103 → 985
    M1_APN_1; Peptidase M1 family containing Aminopeptidase N
    PRK14015
    Location:92 → 987
    pepN; aminopeptidase N; Provisional

  3. NM_202354.1 → NP_974083.1  Peptidase M1 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974083.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EL45, B3H621
    Conserved Domains (2) summary
    cd09600
    Location:103 → 930
    M1_APN_1; Peptidase M1 family containing Aminopeptidase N
    PRK14015
    Location:92 → 930
    pepN; aminopeptidase N; Provisional

  4. NM_105053.3 → NP_176563.3  Peptidase M1 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176563.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EL45, F4I3R4
    Conserved Domains (2) summary
    cd09600
    Location:103 → 891
    M1_APN_1; Peptidase M1 family containing Aminopeptidase N
    TIGR02414
    Location:104 → 902
    pepN_proteo; aminopeptidase N, Escherichia coli type

  5. NM_001334126.1 → NP_001322486.1  Peptidase M1 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4I3R2, Q0WMR3, Q8H0S9, Q9CAE1, Q9CAJ3
    UniProtKB/TrEMBL
    A0A178W6H1, A0A7G2E3S4

  6. NM_001334125.1 → NP_001322487.1  Peptidase M1 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W810, A0A7G2DZR6, F4I3R1

  7. NM_001334124.1 → NP_001319311.1  Peptidase M1 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W810, A0A7G2DZR6, F4I3R1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8H0S9.1

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