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Class I peptide chain release factor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842585, updated on 18-Sep-2024

Summary

Official Full Name
Class I peptide chain release factor
Primary source
TAIR:AT1G62850
Locus tag
AT1G62850
See related
Araport:AT1G62850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (23271703..23274340, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene LSD1-like 1 Neighboring gene miscRNA Neighboring gene ankyrin repeat/KH domain protein (DUF1442) Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene uncharacterized protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001084291.2
NM_001084292.1
NM_001334053.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables translation release factor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in translational termination IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
 
located_in nucleus HDA PubMed 

General protein information

Preferred Names
Class I peptide chain release factor
NP_001077760.1
  • Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); Has 2349 Blast hits to 2349 proteins in 1057 species: Archae - 0; Bacteria - 1715; Metazoa - 148; Fungi - 110; Plants - 54; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink).
NP_001077761.1
  • Class I peptide chain release factor; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352); Has 2349 Blast hits to 2349 proteins in 1057 species: Archae - 0; Bacteria - 1715; Metazoa - 148; Fungi - 110; Plants - 54; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    23271703..23274340 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001084291.2NP_001077760.1  Class I peptide chain release factor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077760.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W3I9, Q84JF2
    Conserved Domains (1) summary
    PRK09256
    Location:96234
    PRK09256; hypothetical protein; Provisional
  2. NM_001084292.1NP_001077761.1  Class I peptide chain release factor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077761.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W3I9, Q84JF2
    Conserved Domains (1) summary
    PRK09256
    Location:96234
    PRK09256; hypothetical protein; Provisional
  3. NM_001334053.1NP_001322473.1  Class I peptide chain release factor [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W537, A0A1P8AU33