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Mitochondrial transcription termination factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842507, updated on 18-Sep-2024

Summary

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Official Full Name
Mitochondrial transcription termination factor family protein
Primary source
TAIR:AT1G62110
Locus tag
AT1G62110
See related
Araport:AT1G62110
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F19K23.28; F19K23_28
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (22957876..22959884, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene AAA-type ATPase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_104892.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Mitochondrial transcription termination factor family protein
NP_176402.2
  • Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G62085.1); Has 1071 Blast hits to 876 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 0; Plants - 988; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22957876..22959884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104892.3 → NP_176402.2  Mitochondrial transcription termination factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176402.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WRF3, Q8GY68
    Conserved Domains (1) summary
    pfam02536
    Location:88 → 435
    mTERF
Nucleotide Protein
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