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Lung seven transmembrane receptor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842464, updated on 18-Sep-2024

Summary

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Official Full Name
Lung seven transmembrane receptor family protein
Primary source
TAIR:AT1G61670
Locus tag
AT1G61670
See related
Araport:AT1G61670
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T13M11.2; T13M11_2
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (22769364..22772426)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene serine protease, putative (Protein of unknown function, DUF538) Neighboring gene ncRNA Neighboring gene terpene synthase 14 Neighboring gene miscRNA Neighboring gene Defensin-like (DEFL) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Label-free protein quantification for plant Golgi protein localization and abundance. Nikolovski N, et al. Plant Physiol, 2014 Oct. PMID 25122472, Free PMC Article
  2. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001333999.1
NM_104849.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in Golgi apparatus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Lung seven transmembrane receptor family protein
NP_001319287.1
  • Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G10980.1); Has 653 Blast hits to 651 proteins in 175 species: Archae - 0; Bacteria - 2; Metazoa - 278; Fungi - 148; Plants - 158; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22769364..22772426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333999.1 → NP_001319287.1  Lung seven transmembrane receptor family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W5T5, A0A384KW44, A0A5S9WNU3, Q8GYD0
    Conserved Domains (1) summary
    pfam06814
    Location:178 → 464
    Lung_7-TM_R; Lung seven transmembrane receptor

  2. NM_104849.4 → NP_176360.2  Lung seven transmembrane receptor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176360.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W5T5, A0A384KW44, A0A5S9WNU3, Q8GYD0
    Conserved Domains (1) summary
    pfam06814
    Location:178 → 464
    Lung_7-TM_R; Lung seven transmembrane receptor
Nucleotide Protein
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