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S-locus lectin protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842457, updated on 18-Sep-2024

Summary

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Official Full Name
S-locus lectin protein kinase family protein
Primary source
TAIR:AT1G61610
Locus tag
AT1G61610
See related
Araport:AT1G61610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T25B24.4; T25B24_4
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (22733359..22736858)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DUF1262 family protein (DUF1262) Neighboring gene phosphoinositide binding protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calmodulin binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in recognition of pollen IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
S-locus lectin protein kinase family protein
NP_176355.1
  • S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 122475 Blast hits to 120608 proteins in 4623 species: Archae - 110; Bacteria - 13774; Metazoa - 44808; Fungi - 10369; Plants - 35077; Viruses - 393; Other Eukaryotes - 17944 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22733359..22736858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333993.1 → NP_001321603.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ARD8, A0A5S9WRA2

  2. NM_104843.2 → NP_176355.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176355.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SY89
    UniProtKB/TrEMBL
    A0A178W8X6, A0A5S9WRA2
    Conserved Domains (4) summary
    cd01098
    Location:346 → 431
    PAN_AP_plant; Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and ...
    cd14066
    Location:531 → 796
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam00954
    Location:212 → 329
    S_locus_glycop; S-locus glycoprotein domain
    pfam01453
    Location:77 → 180
    B_lectin; D-mannose binding lectin
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SY89.1

Gene LinkOut

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