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LRR and NB-ARC domains-containing disease resistance protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842425, updated on 18-Sep-2024

Summary

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Official Full Name
LRR and NB-ARC domains-containing disease resistance protein
Primary source
TAIR:AT1G61310
Locus tag
AT1G61310
See related
Araport:AT1G61310
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T1F9.20; T1F9_20
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (22612998..22616373, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene LRR and NB-ARC domains-containing disease resistance protein Neighboring gene ncRNA Neighboring gene FBD / Leucine Rich Repeat domains containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
  2. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_104812.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
LRR and NB-ARC domains-containing disease resistance protein
NP_176326.2
  • LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22612998..22616373 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104812.3 → NP_176326.2  LRR and NB-ARC domains-containing disease resistance protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176326.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HTJ4, O64789
    Conserved Domains (3) summary
    sd00031
    Location:526 → 547
    LRR_1; leucine-rich repeat [structural motif]
    pfam00931
    Location:158 → 442
    NB-ARC; NB-ARC domain
    pfam13855
    Location:546 → 606
    LRR_8; Leucine rich repeat
Nucleotide Protein
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