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NAD(P)-linked oxidoreductase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842363, updated on 18-Sep-2024

Summary

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Official Full Name
NAD(P)-linked oxidoreductase superfamily protein
Primary source
TAIR:AT1G60690
Locus tag
AT1G60690
See related
Araport:AT1G60690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F8A5.21; F8A5_21
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (22349759..22351780, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF3755) Neighboring gene ncRNA Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene SMAD/FHA domain-containing protein Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene RNA-directed DNA polymerase (reverse transcriptase)-related family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
  2. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_104752.2

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast envelope HDA PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
NAD(P)-linked oxidoreductase superfamily protein
NP_176268.1
  • NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60710.1); Has 30326 Blast hits to 30300 proteins in 2568 species: Archae - 659; Bacteria - 20203; Metazoa - 1608; Fungi - 2287; Plants - 1265; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22349759..22351780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104752.2 → NP_176268.1  NAD(P)-linked oxidoreductase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176268.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O22707
    UniProtKB/TrEMBL
    A0A178WLQ7, A0A5S9WN40, A0A654EL94
    Conserved Domains (1) summary
    cd19145
    Location:8 → 310
    AKR_AKR13D1; AKR13D family of aldo-keto reductase (AKR)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O22707.1

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