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NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842319, updated on 18-Sep-2024

Summary

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Official Full Name
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Primary source
TAIR:AT1G60240
Locus tag
AT1G60240
See related
Araport:AT1G60240
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T13D8.13; T13D8_13
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (22215168..22216329, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein Neighboring gene UB-like protease 1D Neighboring gene Radical SAM superfamily protein Neighboring gene B-box zinc finger family protein Neighboring gene beta glucosidase 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
NP_176230.2
  • NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G60340.1); Has 109 Blast hits to 82 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22215168..22216329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104714.4 → NP_176230.2  NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176230.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WNS5, A0A5S9WNG2, A0A654EPR0, O80747, Q1ECJ5
    Conserved Domains (1) summary
    pfam02365
    Location:11 → 140
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
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