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B-block-binding subunit of TFIIIC protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842239, updated on 18-Sep-2024

Summary

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Official Full Name
B-block-binding subunit of TFIIIC protein
Primary source
TAIR:AT1G59453
Locus tag
AT1G59453
See related
Araport:AT1G59453
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T4M14.16; T4M14_16
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (21846902..21849405, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S5 family protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene B-block-binding subunit of TFIIIC protein Neighboring gene B-block-binding subunit of TFIIIC protein Neighboring gene Auxin-responsive GH3 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_104642.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase III promoter IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
part_of transcription factor TFIIIC complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
B-block-binding subunit of TFIIIC protein
NP_176158.2
  • B-block binding subunit of TFIIIC; CONTAINS InterPro DOMAIN/s: B-block binding subunit of TFIIIC (InterPro:IPR007309); BEST Arabidopsis thaliana protein match is: B-block binding subunit of TFIIIC (TAIR:AT1G17450.2); Has 138 Blast hits to 121 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 3; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    21846902..21849405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104642.2 → NP_176158.2  B-block-binding subunit of TFIIIC protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WQU6, Q94HW6
Nucleotide Protein
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